The detailed information of tRNA gene sequence


Sequence ID>WENV170657639
Genome IDJTFP01006030
Search identical group
Phylum/Class[JTFP] activated sludge metagenome; sludge from laboratory unaugmented bioreactor treating industrial wastewater
Species
Start position on genome 380
End posion on genome 470
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gccatcccct
tRNA gene sequence 
GGAGGGTTGGCAGAGCTGGTTGATTGCACCGGTCTTGAAAACCGGCATGCCTTTGCGGGC
ATCTGGGGTTCGAATCCCTAACCCTCCGCCA
Downstream region at tRNA end position 
ctagtgcgtt
Secondary structure (Cloverleaf model)
>WENV170657639	Ser	TGA
                   t      GCCA ctagtgcgtt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     A T C C C     A
    T C G A        G      | + | | |     G
  G         G A C G       T G G G G     C
  G         + | | |                 T T
  T         T T G C
    T G A          A     CATGCCTTTGCGGGCATC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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