The detailed information of tRNA gene sequence


Sequence ID>WENV170657669
Genome IDJTFP01007632
Search identical group
Phylum/Class[JTFP] activated sludge metagenome; sludge from laboratory unaugmented bioreactor treating industrial wastewater
Species
Start position on genome 138
End posion on genome 229
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttattaataT
tRNA gene sequence 
AGAGTTGTGGCCGAGAGGCTTAAGGCGGTGTCTTGGAAAGGCATTAACGGATGATGAATT
CGTTCGCAGGTTCGAATCCTGTCAACTCTGTtt
Downstream region at tRNA end position 
tttgcnnnnn
Secondary structure (Cloverleaf model)
>WENV170657669	Ser	GGA
                   T      GTtt tttgcnnnnn
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A
                     T - A
                     G - C          T A
                    T     T G T C C     A
      A G A        G      + | | | |     G
    G       G C C G       G C A G G     C
    G         | | |                 T T
    C       A G G C
      T T A        G     TAACGGATGATGAATTCGTTC
                    G + T
                    T - A
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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