The detailed information of tRNA gene sequence


Sequence ID>WENV170657671
Genome IDJTFP01007889
Search identical group
Phylum/Class[JTFP] activated sludge metagenome; sludge from laboratory unaugmented bioreactor treating industrial wastewater
Species
Start position on genome 106
End posion on genome 198
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gccccgtttt
tRNA gene sequence 
GGAGAGGTGCTCGAGTGGTTGAAGAGGTACGCCTGGAAAGCGTATATACGGTGTGGAATC
GTATCGAGAGTTCGAATCTCTTCCTCTCCGCAA
Downstream region at tRNA end position 
caaattcagg
Secondary structure (Cloverleaf model)
>WENV170657671	Ser	GGA
                   t      GCAA caaattcagg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C T C     A
      T G A        G      + | | | |     G
    G       G C T C       G A G A G     C
    G         | | |                 T T
    T       A G A G
      T G A        G     TATACGGTGTGGAATCGTATC
                    T - A
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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