The detailed information of tRNA gene sequence


Sequence ID>WENV170657711
Genome IDJTFP01011419
Search identical group
Phylum/Class[JTFP] activated sludge metagenome; sludge from laboratory unaugmented bioreactor treating industrial wastewater
Species
Start position on genome 2253
End posion on genome 2338
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tttcgtttct
tRNA gene sequence 
GGAAGATGCCGCTCAGTGGTGGGCGAACCGGTTTGAACCCGGTGGTGCTGGTAACGGTAG
GGGTTCGACTCCTCCATCTTCCGCCA
Downstream region at tRNA end position 
tatccctcca
Secondary structure (Cloverleaf model)
>WENV170657711	Ser	TGA
                   t      GCCA tatccctcca
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T - A          T C
                    G     C C T C C     A
      G A C        C        | + | |     G
    T       T C G C       A G G G G     C
    G       + | | |                 T T
    G       G G C G
      T G          A     GGTGCTGGTAACGGT
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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