The detailed information of tRNA gene sequence


Sequence ID>WENV170657761
Genome IDJTFP01016263
Search identical group
Phylum/Class[JTFP] activated sludge metagenome; sludge from laboratory unaugmented bioreactor treating industrial wastewater
Species
Start position on genome 532
End posion on genome 439
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tcgcagaggg
tRNA gene sequence 
GGAAGCGTATCGTCACCGGTGTGGCGCCCGGTCTTCAAAACCGGTGGAAGGTCGAGAGGT
CTTCGGTAGGTTCGACTCCTATACGCTTCCGCCA
Downstream region at tRNA end position 
caatgctcca
Secondary structure (Cloverleaf model)
>WENV170657761	SeC(p)	TCA
                   g      GCCA caatgctcca
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     T - A          T C
                    A     T A T C C     A
      C C A        T      + | | | |     G
    G       C T G C       G T A G G     C
    G       | + | |                 T T
    T       G G C G
      G T          C     TGGAAGGTCGAGAGGTCTTCG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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