The detailed information of tRNA gene sequence


Sequence ID>WENV170657848
Genome IDJTFP01026460
Search identical group
Phylum/Class[JTFP] activated sludge metagenome; sludge from laboratory unaugmented bioreactor treating industrial wastewater
Species
Start position on genome 7333
End posion on genome 7244
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gacgagatac
tRNA gene sequence 
GGTGAAGTGTCCGAGTGGCTTAAGGAGCACGCCTGGAAAGTGTGTATACAAGAAATTGTA
TCGAGAGTTCGAATCTCTCCTTCACCGCCA
Downstream region at tRNA end position 
aattgagaaa
Secondary structure (Cloverleaf model)
>WENV170657848	Ser	GGA
                   c      GCCA aattgagaaa
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G A G     C
    G         | | |                 T T
    C       A G G A
      T T A        G     TATACAAGAAATTGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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