The detailed information of tRNA gene sequence


Sequence ID>WENV170657875
Genome IDJTFP01027660
Search identical group
Phylum/Class[JTFP] activated sludge metagenome; sludge from laboratory unaugmented bioreactor treating industrial wastewater
Species
Start position on genome 1191
End posion on genome 1284
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taatttacac
tRNA gene sequence 
GGAGAGGTGGCCGAGTCGGCTGAAGGCGCTCGCCTGCTAAGCGAGTGTACGGCGTAAAAC
CGTACCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
ttttatatct
Secondary structure (Cloverleaf model)
>WENV170657875	Ser	GCT
                   c      GCCA ttttatatct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C T G A        G      | | | | |     G
  G         G C C G       G A G G G     C
  G           | | |                 T T
  C         A G G C
    T G A          G     TGTACGGCGTAAAACCGTACC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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