The detailed information of tRNA gene sequence


Sequence ID>WENV170657920
Genome IDJTFP01033521
Search identical group
Phylum/Class[JTFP] activated sludge metagenome; sludge from laboratory unaugmented bioreactor treating industrial wastewater
Species
Start position on genome 1047
End posion on genome 952
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
acaacttaat
tRNA gene sequence 
GGGAGTAGTTAGTAGCCTGGTGGCGCTCACGGTCTTCAAAACCGATGGAAGGCGTATCCC
GTCTTCGGTGGGTTCGATTCCCATCTACTCCCGCCA
Downstream region at tRNA end position 
atcaataaaa
Secondary structure (Cloverleaf model)
>WENV170657920	SeC(p)	TCA
                   t      GCCA atcaataaaa
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     A - T
                     G - C          T T
                    T     T A C C C     A
      C C G        T      + | | | |     G
    T       A T G A       G T G G G     C
    G         + | |                 T T
    G       C G C T
      T G G        C     TGGAAGGCGTATCCCGTCTTCG
                    A   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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