The detailed information of tRNA gene sequence


Sequence ID>WENV170657963
Genome IDJTFP01037852
Search identical group
Phylum/Class[JTFP] activated sludge metagenome; sludge from laboratory unaugmented bioreactor treating industrial wastewater
Species
Start position on genome 216
End posion on genome 126
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cggcttcgtc
tRNA gene sequence 
GGACAGGTGGATGAGTGGTTTAAGTCGCACGCCTGGAAAGCGTGTTTGGGATAATATCCC
AACGCGGGTTCGAATCCCGCCCTGTCCGCCA
Downstream region at tRNA end position 
gaactctcag
Secondary structure (Cloverleaf model)
>WENV170657963	Ser	GGA
                   c      GCCA gaactctcag
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G T A G       G C G G G     C
    G         + | |                 T T
    T       A G T C
      T T A        G     TTTGGGATAATATCCCAAC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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