The detailed information of tRNA gene sequence


Sequence ID>WENV170657984
Genome IDJTFP01040695
Search identical group
Phylum/Class[JTFP] activated sludge metagenome; sludge from laboratory unaugmented bioreactor treating industrial wastewater
Species
Start position on genome 185
End posion on genome 93
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cccccgcaac
tRNA gene sequence 
GGTGAGGTGGCCGAGAGGCTGAAGGCACTCCCCTGCTAAGGGAGCATGCGGTCAAAAACC
GCATCGAGGGTTCGAATCCCTCCCTCACCGCCA
Downstream region at tRNA end position 
ttgcaccctg
Secondary structure (Cloverleaf model)
>WENV170657984	Ser	GCT
                   c      GCCA ttgcaccctg
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     CATGCGGTCAAAAACCGCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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