The detailed information of tRNA gene sequence


Sequence ID>WENV170658001
Genome IDJTFP01042433
Search identical group
Phylum/Class[JTFP] activated sludge metagenome; sludge from laboratory unaugmented bioreactor treating industrial wastewater
Species
Start position on genome 146
End posion on genome 237
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttattgataT
tRNA gene sequence 
AGAGTTGTGGCCGAGAGGCTTAAGGCGGTGTCTTGGAAAGGCATTAACGGATGATGAATT
CGTTCGCAGGTTCGAATCCTGTCAACTCTGTtt
Downstream region at tRNA end position 
tttgcnnnnn
Secondary structure (Cloverleaf model)
>WENV170658001	Ser	GGA
                   T      GTtt tttgcnnnnn
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A
                     T - A
                     G - C          T A
                    T     T G T C C     A
      A G A        G      + | | | |     G
    G       G C C G       G C A G G     C
    G         | | |                 T T
    C       A G G C
      T T A        G     TAACGGATGATGAATTCGTTC
                    G + T
                    T - A
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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