The detailed information of tRNA gene sequence


Sequence ID>WENV170658054
Genome IDJTFP01049275
Search identical group
Phylum/Class[JTFP] activated sludge metagenome; sludge from laboratory unaugmented bioreactor treating industrial wastewater
Species
Start position on genome 798
End posion on genome 706
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgtttcttac
tRNA gene sequence 
GGTGAGGTGGCCGAGAGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATGCGGCTTATACCC
GCATCGAGGGTTCGAATCCCTCCTTCACCGCCA
Downstream region at tRNA end position 
tcaagataag
Secondary structure (Cloverleaf model)
>WENV170658054	Ser	GCT
                   c      GCCA tcaagataag
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATGCGGCTTATACCCGCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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