The detailed information of tRNA gene sequence


Sequence ID>WENV170658164
Genome IDJTFP01063669
Search identical group
Phylum/Class[JTFP] activated sludge metagenome; sludge from laboratory unaugmented bioreactor treating industrial wastewater
Species
Start position on genome 448
End posion on genome 537
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ctccatataT
tRNA gene sequence 
GGAAGATTACTCAAGAGGCTCAAGAGGCCGTGTTGGAAACGCGGTAGGCGTGTAACAGCG
TGCATGGGTTCGAATCCCATATCTTCCGTat
Downstream region at tRNA end position 
tgcaagaacg
Secondary structure (Cloverleaf model)
>WENV170658164	Ser	GGA
                   T      GTat tgcaagaacg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T - A          T A
                    T     T A C C C     A
      A G A        A      | | | | |     G
    G       A C T C       A T G G G     C
    G         | | |                 T T
    C       A G A G
      T C A        G     TAGGCGTGTAACAGCGTGC
                    C - G
                    C - G
                    G - C
                    T + G
                    G - C
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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