The detailed information of tRNA gene sequence


Sequence ID>WENV170658225
Genome IDJTFP01070388
Search identical group
Phylum/Class[JTFP] activated sludge metagenome; sludge from laboratory unaugmented bioreactor treating industrial wastewater
Species
Start position on genome 1059
End posion on genome 1135
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttcaagtgtt
tRNA gene sequence 
GGCTATGTAGCTCAGTTGGTTAGAGCATCGCACTCATAATGCGGGGGTCACAGGTTCGAA
TCCCGTCATAGCCACCA
Downstream region at tRNA end position 
ttactggggt
Secondary structure (Cloverleaf model)
>WENV170658225	Met	CAT
                   t      ACCA ttactggggt
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T
                     T - A
                     G - C          T A
                    T     T G C C C     A
      T G A        A      | |   | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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