The detailed information of tRNA gene sequence


Sequence ID>WENV170658259
Genome IDJTFP01076957
Search identical group
Phylum/Class[JTFP] activated sludge metagenome; sludge from laboratory unaugmented bioreactor treating industrial wastewater
Species
Start position on genome 147
End posion on genome 72
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ctcatcttgt
tRNA gene sequence 
AGGTCAGTAGCTCCAATGGTAGAGCATCGGTCTCCAAAACCGAGTGATGGGGGTTCGAGT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
aaaaatcaag
Secondary structure (Cloverleaf model)
>WENV170658259	Trp	CCA
                   t      GCCA aaaaatcaag
                     A - T
                     G - C
                     G - C
                     T + G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      A A C        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGAT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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