The detailed information of tRNA gene sequence


Sequence ID>WENV170658263
Genome IDJTFP01077712
Search identical group
Phylum/Class[JTFP] activated sludge metagenome; sludge from laboratory unaugmented bioreactor treating industrial wastewater
Species
Start position on genome 911
End posion on genome 820
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
nnnnnnataT
tRNA gene sequence 
AGAGTTGTGGCCGAGAGGCTTAAGGCGGTGTCTTGGAAAGGCATTAACGGATGATGAATT
CGTTCGCAGGTTCGAATCCTGTCAACTCTGTtt
Downstream region at tRNA end position 
tttgctctat
Secondary structure (Cloverleaf model)
>WENV170658263	Ser	GGA
                   T      GTtt tttgctctat
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A
                     T - A
                     G - C          T A
                    T     T G T C C     A
      A G A        G      + | | | |     G
    G       G C C G       G C A G G     C
    G         | | |                 T T
    C       A G G C
      T T A        G     TAACGGATGATGAATTCGTTC
                    G + T
                    T - A
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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