The detailed information of tRNA gene sequence


Sequence ID>WENV170658271
Genome IDJTFP01078363
Search identical group
Phylum/Class[JTFP] activated sludge metagenome; sludge from laboratory unaugmented bioreactor treating industrial wastewater
Species
Start position on genome 319
End posion on genome 243
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
caatggccgt
tRNA gene sequence 
CGCGGGATGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTTGGTTCAAA
TCCAGCTCCCGCAACCA
Downstream region at tRNA end position 
gtttcacgaa
Secondary structure (Cloverleaf model)
>WENV170658271	Met	CAT
                   t      ACCA gtttcacgaa
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G A C C     A
      T G A        G      | + | | |     A
    C       C G A G       G T T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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