The detailed information of tRNA gene sequence


Sequence ID>WENV170658277
Genome IDJTFP01078988
Search identical group
Phylum/Class[JTFP] activated sludge metagenome; sludge from laboratory unaugmented bioreactor treating industrial wastewater
Species
Start position on genome 451
End posion on genome 543
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgttgatgag
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATGGGGTTTATAGCC
TCATCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tgactcgcag
Secondary structure (Cloverleaf model)
>WENV170658277	Ser	GCT
                   g      GCCA tgactcgcag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATGGGGTTTATAGCCTCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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