The detailed information of tRNA gene sequence


Sequence ID>WENV170658309
Genome IDJTFP01084378
Search identical group
Phylum/Class[JTFP] activated sludge metagenome; sludge from laboratory unaugmented bioreactor treating industrial wastewater
Species
Start position on genome 105
End posion on genome 18
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agcgaagtaa
tRNA gene sequence 
GGAAGTTTGGGTGAGTGGCTGAAACCACCAGTTTGCTAAACTGACGTACGGGCAACCGTA
CCACGAGTTCGAATCTCGTAGCTTCCGCtt
Downstream region at tRNA end position 
acaaacgccg
Secondary structure (Cloverleaf model)
>WENV170658309	Ser	GCT
                   a      GCtt acaaacgccg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T + G
                     T - A          T A
                    T     T G C T C     A
      T G A        G      | | | | |     G
    G       G T G G       A C G A G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTACGGGCAACCGTACC
                    C   A
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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