The detailed information of tRNA gene sequence


Sequence ID>WENV170658334
Genome IDJTFP01088062
Search identical group
Phylum/Class[JTFP] activated sludge metagenome; sludge from laboratory unaugmented bioreactor treating industrial wastewater
Species
Start position on genome 849
End posion on genome 762
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cttctgcaaa
tRNA gene sequence 
GGACAGCTGGCCGAGTGGTCGAAGGCGCACGCCTGGAACGCGTGTATAGGGCAACCTATC
GAGGGTTCGAATCCCTCGCTGTCCACCA
Downstream region at tRNA end position 
tcaatcaact
Secondary structure (Cloverleaf model)
>WENV170658334	Ser	GGA
                   a      ACCA tcaatcaact
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     C - G          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATAGGGCAACCTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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