The detailed information of tRNA gene sequence


Sequence ID>WENV170658362
Genome IDJTFP01092814
Search identical group
Phylum/Class[JTFP] activated sludge metagenome; sludge from laboratory unaugmented bioreactor treating industrial wastewater
Species
Start position on genome 364
End posion on genome 274
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tctgcccaat
tRNA gene sequence 
AGAGAGGTGGATGAGTGGTTTAAGTCGCACGCCTGGAAAGCGTGTATACGTGAATAGCGT
ATCGAGGGTTCGAATCCCTTCCTCTCTGCCA
Downstream region at tRNA end position 
gaacacaatc
Secondary structure (Cloverleaf model)
>WENV170658362	Ser	GGA
                   t      GCCA gaacacaatc
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G T A G       G A G G G     C
    G         + | |                 T T
    T       A G T C
      T T A        G     TATACGTGAATAGCGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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