The detailed information of tRNA gene sequence


Sequence ID>WENV170658430
Genome IDJTFP01111145
Search identical group
Phylum/Class[JTFP] activated sludge metagenome; sludge from laboratory unaugmented bioreactor treating industrial wastewater
Species
Start position on genome 187
End posion on genome 95
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gccccgcgac
tRNA gene sequence 
GGTGAGGTGGCCGAGAGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATGCGGCTTATACCC
GCATCGAGGGTTCGAATCCCTCCTTCACCGCCA
Downstream region at tRNA end position 
tttagcgccc
Secondary structure (Cloverleaf model)
>WENV170658430	Ser	GCT
                   c      GCCA tttagcgccc
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATGCGGCTTATACCCGCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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