The detailed information of tRNA gene sequence


Sequence ID>WENV170658549
Genome IDJTFP01140948
Search identical group
Phylum/Class[JTFP] activated sludge metagenome; sludge from laboratory unaugmented bioreactor treating industrial wastewater
Species
Start position on genome 115
End posion on genome 206
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tatagagcct
tRNA gene sequence 
GGAGAAGTGGCTGAGCTGGCCGAAGGCACTCCCCTGCTAAGGGAGCATTCGGGATTAAAA
CCGAATCGAGGGTTCGAATCCCTCCTTCTCCTnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170658549	Ser	GCT
                   t      Tnnn nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G T C G       G A G G G     C
  G           + | |                 T T
  C         A G G C
    C G A          A     CATTCGGGATTAAAACCGAATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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