The detailed information of tRNA gene sequence


Sequence ID>WENV170658550
Genome IDJTFP01141560
Search identical group
Phylum/Class[JTFP] activated sludge metagenome; sludge from laboratory unaugmented bioreactor treating industrial wastewater
Species
Start position on genome 104
End posion on genome 192
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgtttgtatt
tRNA gene sequence 
GGAGAGATGCTCGAGTGGTTGAAGAGGCACGCCTGGAAAGCGTGTATACGCCTAAAGCGT
ATCGCGGGTTCGAATCCCGCTCTCTCCGCat
Downstream region at tRNA end position 
aatatcatga
Secondary structure (Cloverleaf model)
>WENV170658550	Ser	GGA
                   t      GCat aatatcatga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C T C       G C G G G     C
    G         | | |                 T T
    T       A G A G
      T G A        G     TATACGCCTAAAGCGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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