The detailed information of tRNA gene sequence


Sequence ID>WENV170658624
Genome IDJTFP01164019
Search identical group
Phylum/Class[JTFP] activated sludge metagenome; sludge from laboratory unaugmented bioreactor treating industrial wastewater
Species
Start position on genome 1025
End posion on genome 1101
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
gatgtcttat
tRNA gene sequence
GTCAAGGTAGCTCAGCTGGCTAGAGCGCTGGTCTCATAAGCCGGAGGTCGAGAGTTCAAG
TCTCTCTCTTGACACCA
Downstream region at tRNA end position
ttttaaagtg
Secondary structure (Cloverleaf model)
>WENV170658624	Met	CAT
                   t      ACCA ttttaaagtg
                     G - C
                     T - A
                     C - G
                     A - T
                     A - T
                     G - C
                     G + T          T G
                    T     C T C T C     A
      C G A        A      | | | | |     A
    T       C T C G       G A G A G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    T + G
                    G - C
                    G - C
                    T + G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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