The detailed information of tRNA gene sequence


Sequence ID>WENV170658655
Genome IDJTFP01173904
Search identical group
Phylum/Class[JTFP] activated sludge metagenome; sludge from laboratory unaugmented bioreactor treating industrial wastewater
Species
Start position on genome 155
End posion on genome 244
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccaacggaaa
tRNA gene sequence 
GGAAGTTTGGGTGAGTGGCTGAAACCAGCAGTTTGCTAAACTGCCGTGCGCGTTTGCGTA
CCGGGGGTTCGAATCCCCCAGCTTCCGCCA
Downstream region at tRNA end position 
ggtttatacc
Secondary structure (Cloverleaf model)
>WENV170658655	Ser	GCT
                   a      GCCA ggtttatacc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T + G
                     T - A          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G G G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTGCGCGTTTGCGTACC
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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