The detailed information of tRNA gene sequence


Sequence ID>WENV170658703
Genome IDJTFP01183990
Search identical group
Phylum/Class[JTFP] activated sludge metagenome; sludge from laboratory unaugmented bioreactor treating industrial wastewater
Species
Start position on genome 136
End posion on genome 47
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgcttcatgc
tRNA gene sequence 
GGAGGTGTGGCCGAGTGGTTGAAGGCAGCGGTCTTGAAAACCGCCGAAGGGGAAACTCTT
CCGTGAGTTCGAATCTCACCGCCTCCGCCA
Downstream region at tRNA end position 
tctgcatagc
Secondary structure (Cloverleaf model)
>WENV170658703	Ser	TGA
                   c      GCCA tctgcatagc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G A G     C
    G         | | |                 T T
    T       A G G C
      T G A        A     CGAAGGGGAAACTCTTCC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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