The detailed information of tRNA gene sequence


Sequence ID>WENV170659258
Genome IDJXWR01002501
Search identical group
Phylum/Class[JXWR] soil metagenome; rice field; ambient CO2
Species
Start position on genome 40098
End posion on genome 40009
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tttttattat
tRNA gene sequence 
GGAGGATTACCCAAGTCTGGCTGAAGGGAACGGTCTTGAAAACCGTCAGGTGGGTCAAAC
CACGCGAGAGTTCGAATCTCTCATCCTCCTttc
Downstream region at tRNA end position 
aattatcgcg
Secondary structure (Cloverleaf model)
>WENV170659258	Ser	TGA
                   t      Tttc aattatcgcg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     C T C T C     A
    C T G A        A      | | | | |     G
  T         A C C C       G A G A G     C
  G           | | |                 T T
  G         A G G G
    C T G A        A     CAGGTGGGTCAAACCACGC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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