The detailed information of tRNA gene sequence


Sequence ID>WENV170662995
Genome IDJYMV01000601
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 126
End posion on genome 38
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aattatatct
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTTAAGGCGCACGCTTGGAAAGCGTGTGTACGTTAATAGCGT
ACCGTGGGTTCGAATCCCACCCTCTCCGCtc
Downstream region at tRNA end position 
caagaattta
Secondary structure (Cloverleaf model)
>WENV170662995	Ser	GGA
                   t      GCtc caagaattta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T T A        G     TGTACGTTAATAGCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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