The detailed information of tRNA gene sequence


Sequence ID>WENV170663214
Genome IDJYMV01003130
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 6006
End posion on genome 5934
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
ttcgtagccg
tRNA gene sequence 
GCCCTTGTAGTTCAATGGATAGAATAGGTCCCTCCTAAGGATTAGATGTAGGTTCGATTC
CTACCAAGGGCACag
Downstream region at tRNA end position 
gaaattaaga
Secondary structure (Cloverleaf model)
>WENV170663214	Arg	CCT
                   g      ACag gaaattaaga
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     T - A
                     G - C          T T
                    T     C A T C C     A
      T A A        A      | | | | |     G
    G       C T T G       G T A G G     C
    G       | | | +                 T T
    A       G A A T
      T A          A     AGAT
                    G + T
                    G + T
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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