The detailed information of tRNA gene sequence


Sequence ID>WENV170663268
Genome IDJYMV01003532
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 4456
End posion on genome 4380
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
acaaccggtc
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCGCGCCCCTGATAAGGGCGAGGTCACTGGTTCAAA
TCCAGTTAGGCCCACCA
Downstream region at tRNA end position 
tcccggattt
Secondary structure (Cloverleaf model)
>WENV170663268	Ile	GAT
                   c      ACCA tcccggattt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G + T          T A
                    T     T G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G - C
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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