The detailed information of tRNA gene sequence


Sequence ID>WENV170663303
Genome IDJYMV01003986
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 303
End posion on genome 229
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aaacaaatcc
tRNA gene sequence 
GGGCGCTTAGCTCAGTTGGTCAGAGCGCTGTCTTCACACGGCAGAGGTCGGCAGTTCGAG
CCTGCCAGTGCCCACtc
Downstream region at tRNA end position 
gtctaaagcc
Secondary structure (Cloverleaf model)
>WENV170663303	Val	CAC
                   c      ACtc gtctaaagcc
                     G - C
                     G - C
                     G - C
                     C - G
                     G + T
                     C - G
                     T - A          C G
                    T     C C G T C     A
      T G A        A      | | | | |     G
    T       C T C G       G G C A G     C
    G       | | | |                 T T
    G       G A G C
      T C A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    T + G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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