The detailed information of tRNA gene sequence


Sequence ID>WENV170663305
Genome IDJYMV01003996
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 3119
End posion on genome 3209
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agcgttgtat
tRNA gene sequence 
AGAGAGGTGGCCGAGTGGTCGAAGGCGCACGCCTGGAAAGTGTGTATACGTCAAAAGCGT
ATCGAGGGTTCGAATCCCTTCCTCTCTGCTA
Downstream region at tRNA end position 
aattaagatt
Secondary structure (Cloverleaf model)
>WENV170663305	Ser	GGA
                   t      GCTA aattaagatt
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATACGTCAAAAGCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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