The detailed information of tRNA gene sequence


Sequence ID>WENV170663343
Genome IDJYMV01004415
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 5742
End posion on genome 5830
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aagaataatt
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGCTGAAGGAGCACGCTTGGAAAGCGTGTATGCGGTTTTTCCGT
ATCGAGGGTTCGAATCCCTCTCTCTCCGCtc
Downstream region at tRNA end position 
ctctataaac
Secondary structure (Cloverleaf model)
>WENV170663343	Ser	GGA
                   t      GCtc ctctataaac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      T G A        G     TATGCGGTTTTTCCGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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