The detailed information of tRNA gene sequence


Sequence ID>WENV170663378
Genome IDJYMV01004992
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 5460
End posion on genome 5536
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
atatatttaa
tRNA gene sequence 
GCGCTCGTAGCTCAATTGGATAGAGCGTCTGGCTTCGGACCAGAAGGTTGAGGGTTCAAC
TCCTTCCGGGCGCACCA
Downstream region at tRNA end position 
attagtcatt
Secondary structure (Cloverleaf model)
>WENV170663378	Arg	TCG
                   a      ACCA attagtcatt
                     G - C
                     C - G
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T C
                    T     C T T C C     A
      T A A        A      | | + | |     A
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AGGTT
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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