The detailed information of tRNA gene sequence


Sequence ID>WENV170663490
Genome IDJYMV01006032
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 104100
End posion on genome 104174
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccgcaatttt
tRNA gene sequence 
GGCGGAGTAGCTCAGTTGGTTAGAGCAGCGGAATCATAATCCGCGTGTCGGGGGTTCAAG
TCCCTCCTCCGCTACtg
Downstream region at tRNA end position 
attaaaatgt
Secondary structure (Cloverleaf model)
>WENV170663490	Met	CAT
                   t      ACtg attaaaatgt
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T G A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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