The detailed information of tRNA gene sequence


Sequence ID>WENV170663561
Genome IDJYMV01006890
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 6962
End posion on genome 6888
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
nnnagtgtat
tRNA gene sequence 
GTCGCCTTCGTCTATCGGTTAGGACCCCAGGTTTTCATCCTGGTAAGAGGAGTTCGATTC
TCCTAGGCGATGCCA
Downstream region at tRNA end position 
tattctaaag
Secondary structure (Cloverleaf model)
>WENV170663561	Glu	TTC
                   t      GCCA tattctaaag
                     G + T
                     T - A
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A          T T
                    T     T C C T C     A
      C T A        C      | | | | |     G
    G       T C T G       A G G A G     C
    G       + | | |                 T T
    T       G G A C
      T A          C     TAAG
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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