The detailed information of tRNA gene sequence


Sequence ID>WENV170663680
Genome IDJYMV01008479
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 23179
End posion on genome 23103
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnnaat
tRNA gene sequence 
GGCCCCATAGCTCAGTTGGTTAGAGCATCCGACTCATAATCGGCAGGTCCCCTGTTCAAG
TCAGGGTGGGGCCACCA
Downstream region at tRNA end position 
tttttcctcg
Secondary structure (Cloverleaf model)
>WENV170663680	Met	CAT
                   t      ACCA tttttcctcg
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     G G G A C     A
      T G A        A      | | | | |     A
    T       C T C G       C C C T G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    T   C
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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