The detailed information of tRNA gene sequence


Sequence ID>WENV170663701
Genome IDJYMV01008593
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 1476
End posion on genome 1399
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position
cgcacaacgc
tRNA gene sequence
AGGAGCGTAGCTCAGTCTGGCCAGAGCGCTGGTCTCCAAAACCAGTGGCCGGGGGTTCGA
ATCCTCCCGCTCCTGCCA
Downstream region at tRNA end position
atttgcgaag
Secondary structure (Cloverleaf model)
>WENV170663701	Trp	CCA
                   c      GCCA atttgcgaag
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C C T C C     A
    C T G A        A      | | + | |     G
  T         C T C G       G G G G G     C
  G         | | | |                 T T
  G         G A G C
    C C A          G     TGGCC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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