The detailed information of tRNA gene sequence


Sequence ID>WENV170663743
Genome IDJYMV01009062
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 15784
End posion on genome 15871
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aatctgtaac
tRNA gene sequence 
GGAGAGGTGACCGAGTGGCCGAAGGTGCGTGATTGGAAATCACGTGTGCGGGCAACCGTA
CCGAGGGTTCGAATCCCTCTCTCTCCGCnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170663743	Ser	GGA
                   c      GCnn nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TGTGCGGGCAACCGTACC
                    C - G
                    G - C
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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