The detailed information of tRNA gene sequence


Sequence ID>WENV170663782
Genome IDJYMV01009256
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 5442
End posion on genome 5517
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gttattcatT
tRNA gene sequence 
GGGCCGGTCGTCTAGACTGGTAGGATACGCCCTTGGCATGGGTGAGATCGAGGGTTCAAA
TCCCTCCCGGTCCATta
Downstream region at tRNA end position 
atattttttg
Secondary structure (Cloverleaf model)
>WENV170663782	Ala	GGC
                   T      ATta atattttttg
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     C T C C C     A
      A G A        C      | | | | |     A
    C       T C T G       G A G G G     C
    T       + | | +                 T T
    G       G G A T
      G T A        A     AGATC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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