The detailed information of tRNA gene sequence


Sequence ID>WENV170664087
Genome IDJYMV01012701
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 12670
End posion on genome 12596
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttaacatttt
tRNA gene sequence 
GGTCCGGTAGTTCAGTTGGTTAGAATGCCTGCCTGTCACGCAGGAGGTCGCGGGTTCGAG
TCCCGTCCGGACCGCtc
Downstream region at tRNA end position 
aaatgaggcc
Secondary structure (Cloverleaf model)
>WENV170664087	Asp	GTC
                   t      GCtc aaatgaggcc
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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