The detailed information of tRNA gene sequence


Sequence ID>WENV170664188
Genome IDJYMV01013655
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 12214
End posion on genome 12130
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcatccatag
tRNA gene sequence 
GCGGGGATCGCCTAGCTTGGTAGGGCGTAGGATTGCTAATCCTATGTTCGCAAGAACTCG
TGGGTTCAAATCCCTCTCCCCGCGCtt
Downstream region at tRNA end position 
ttttcaagta
Secondary structure (Cloverleaf model)
>WENV170664188	Ser	GCT
                   g      GCtt ttttcaagta
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        C      |   | | |     A
    T       T C C G       G T G G G     C
    T       + | | |                 T T
    G       G G G C
      G T A        G     TGTTCGCAAGAACTC
                    T - A
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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