The detailed information of tRNA gene sequence


Sequence ID>WENV170664220
Genome IDJYMV01014043
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 5078
End posion on genome 5004
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ttcgtttttt
tRNA gene sequence 
GGCCCGTTCGTCTAGTGGTTAGGACTCAGGATTTTCATTCCTGCAACAGGGGTTCGATTC
CCCTACGGGCTACGA
Downstream region at tRNA end position 
tttatcagtg
Secondary structure (Cloverleaf model)
>WENV170664220	Glu	TTC
                   t      ACGA tttatcagtg
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T T
                    T     T C C C C     A
      T G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          T     CAAC
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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