The detailed information of tRNA gene sequence


Sequence ID>WENV170664380
Genome IDJYMV01015809
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 3078
End posion on genome 3153
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
tttaacgaga
tRNA gene sequence 
GCCCATATAGCTCAGTTGGTAGAGCACTTCCATGGTAAGGAAGAGGTCGTGTGTTCGATT
CACACTGTGGGCACCA
Downstream region at tRNA end position 
aagttattta
Secondary structure (Cloverleaf model)
>WENV170664380	Thr	GGT
                   a      ACCA aagttattta
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     T + G
                     A - T          T T
                    T     C A C A C     A
      T G A        A      | | | | |     G
    T       C T C G       G T G T G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  A       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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