The detailed information of tRNA gene sequence


Sequence ID>WENV170664457
Genome IDJYMV01016433
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 13454
End posion on genome 13380
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tttttactgc
tRNA gene sequence 
GGTGAGGTAGTACAGTCCGGTAGTGCGTAGGCCTGCAAAGCCTGAAGTCGAGAGTTCAAA
TCTCTCCCTCACCTCtt
Downstream region at tRNA end position 
tgatcttggt
Secondary structure (Cloverleaf model)
>WENV170664457	Cys	GCA
                   c      TCtt tgatcttggt
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C T C     A
      T G A        A      | | | | |     A
    C       C A T G       G A G A G     C
    C       | | + |                 T T
    G       G T G C
      G T A        G     AAGTC
                    T + G
                    A - T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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