The detailed information of tRNA gene sequence


Sequence ID>WENV170664679
Genome IDJYMV01018959
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 1446
End posion on genome 1359
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gattcgcaaa
tRNA gene sequence 
GGAGAGATGGCCGAGTGGCCGAAGGCGCACGCCTGGAAAGTGTGTATACGGCAACGTATC
GAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ccacacccct
Secondary structure (Cloverleaf model)
>WENV170664679	Ser	GGA
                   a      GCCA ccacacccct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      C G A        G     TATACGGCAACGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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