The detailed information of tRNA gene sequence


Sequence ID>WENV170664868
Genome IDJYMV01020533
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 1049
End posion on genome 1138
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aacccaattt
tRNA gene sequence 
GGAGGGGTGGCCGAGCGGCTTAAGGCGGCACCCTGCTAAGGTGTTTTAGGTGAAATATCC
TAACGTGGGTTCGAATCCCACCCCCTCCGCgt
Downstream region at tRNA end position 
agttagagag
Secondary structure (Cloverleaf model)
>WENV170664868	Ser	GCT
                   t      GCgt agttagagag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T T A        G     TTTAGGTGAAATATCCTAAC
                    G + T
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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