The detailed information of tRNA gene sequence


Sequence ID>WENV170664894
Genome IDJYMV01020761
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 6017
End posion on genome 6107
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tacagatata
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTCGAAAGCGGCGGTTTCGAAAGCCGTTGACGGGTAAACCCCG
TCCGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
ctaatttagg
Secondary structure (Cloverleaf model)
>WENV170664894	Ser	CGA
                   a      GCCA ctaatttagg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G T C G       G G G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TGACGGGTAAACCCCGTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T + G
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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