The detailed information of tRNA gene sequence


Sequence ID>WENV170664895
Genome IDJYMV01020761
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 7810
End posion on genome 7900
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
taaagaaata
tRNA gene sequence 
GGAGAGGTGGCAGAGCGGTCGAATGCGGCGGTCTTGAAAACCGTTGACGGGTAATCCTCG
TCCGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
taaactaggt
Secondary structure (Cloverleaf model)
>WENV170664895	Ser	TGA
                   a      GCCA taaactaggt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGACGGGTAATCCTCGTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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